We support web service of PseudoViewer. Developers are advised to follow the following instruction to use the web service.
|
|
|
Client using Java |
- |
Following libraries are required.
|
- |
Sample client in Java - source code
|
- |
Using WSDL2Java |
|
Related document in Apache AXIS
WSPseudoViewer package (kr.ac.inha.wilab.WSPseudoViewer) in client example can be generated by WSDL2Java tool in apache axis. If there is a chage in the PseudoViewer web service,
WSPseudoViewer package should be updated. The command for PseudoViewer web service is follows.
> java org.apache.axis.wsdl.WSDL2Java http://165.246.44.42/WSPseudoViewer/WSPseudoViewer.asmx?WSDL
Before using WSDL2Java tool, make sure that the related jar files are in the classpath.
The related jar files are
The command for setting classpath is follows. Any version of jar files is OK.
> set classpath=axis.jar;commons-logging-1.0.4.jar;commons-discovery-0.2.jar;jaxrpc.jar;saaj.jar;activation.jar;mailapi.jar;wsdl4j-1.5.1.jar
| |
|
|
String formats of xml elements |
|
<Option> |
<Drawing_option> - Details
default, Standard view, Outline view, Pseudoknot highlight,
Support line, Base pair type, Additional line
<Output_type>
url png, url gif, url svg, raw png, raw gif, eps, coordinations
|
<Numbering> |
<Base_numbers>
[0-9,]+
<Numbering_option>
default, Start of structure, End of structure, Start of stem, End of stem
|
<WSPVIn_data>
<Pair_info> |
<Pair> - Examples
[0-9]+[-][0-9]+[;][0-9]+[-][0-9]+
|
<WSPVIn_file_data>
|
- Details of input format of PseudoViewer
|
|
|