Optional input
1. Name: the name of the structure.
2. Start Base: the starting number of the structure. If this is omitted, the starting number is 1 by default.
3. Draw options
| Default | Off standard view | Off support line | Off pseudoknot highlight | Off numbering |
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| Off standard view and pseudoknot highlihgt |
Off additional line | On additional line |
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| Scale: 0.5 | Scale: 1 | Scale: 2 |
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4. Numbering
Required input
A structure and sequence of an RNA is required. There are three ways to enter the structure.
1. Sequence and structure:
2. PV input:
3. Load PseudoViewer input file:
Structure drawing
The structure drawing of PseudoViewer can be saved as 'EPS', 'PNG' and 'GIF' format. The bracket view generated by PseudoViewer can be stored in a file . We provide Scalable Vector Graphics (SVG) view when you click 'View as SVG'.
SVG view
SVG is an XML-based vector format that produces high-quality, interactive web graphics.
The structure drawing in SVG format supports mouse-over events, which are useful for showing information on structural elements, such as base numbers and base pairs.
| Mouse over event of a base pair | Mouse over event of a base |
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